Symbiomycota
(Redirected from Draft:Symbiomycota)
| Symbiomycota | |
|---|---|
| |
| Amanita pantherina, from the Basidiomycota | |
Scientific classification 
| |
| Domain: | Eukaryota |
| Kingdom: | Fungi |
| Clade: | Amastigomycota |
| Clade: | Symbiomycota |
| Divisions | |
Symbiomycota is a clade of fungi containing both Glomeromycota and Dikarya.[1] It includes all mycorrhizal fungi except Endogone[2][3] and the Mucoromycotina fine root endophytes, which both belong in Mucoromycota.[4]
Symbiomycota is supported by phylogenetic analyses based on ribosomal DNA and rpb2 data but not from rpb1 data.[2][5][1] More recent analyses using genome-scale, multilocus protein sequence data have either recovered this clade[6] or have failed to recover it, with Glomeromycota falling within Mucoromycota instead (forming Mucoromyceta).[7][8][9]
Etymology
[edit]The name references symbiosis due to the inclusion of most mycorrhizal fungi within this clade.[5]
Taxonomy
[edit]The following dendrogram shows the placement of Symbiomycota within the kingdom Fungi summarized from rDNA phylogenies.[10][1]
References
[edit]- ^ a b c Tedersoo, Leho; Sánchez-Ramírez, Santiago; Kõljalg, Urmas; Bahram, Mohammad; Döring, Markus; Schigel, Dmitry; May, Tom; Ryberg, Martin; Abarenkov, Kessy (2018-05-01). "High-level classification of the Fungi and a tool for evolutionary ecological analyses". Fungal Diversity. 90 (1): 135–159. doi:10.1007/s13225-018-0401-0. hdl:10138/238983. ISSN 1878-9129. S2CID 21714270.
- ^ a b Redecker, Dirk; Raab, Philipp (2006). "Phylogeny of the Glomeromycota (Arbuscular Mycorrhizal Fungi): Recent Developments and New Gene Markers". Mycologia. 98 (6): 885–895. doi:10.1080/15572536.2006.11832618. ISSN 0027-5514. JSTOR 20444778. PMID 17486965. S2CID 527076.
- ^ Warcup, J.H. (March 1990). "Taxonomy, culture and mycorrhizal associations of some zygosporic Endogonaceae". Mycological Research. 94 (2): 173–178. doi:10.1016/s0953-7562(09)80609-6. ISSN 0953-7562.
- ^ Howard, Nathan; Pressel, Silvia; Kaye, Ryan S.; Daniell, Tim J.; Field, Katie J. (2022). "The potential role of Mucoromycotina 'fine root endophytes' in plant nitrogen nutrition". Physiologia Plantarum. 174 (3).
- ^ a b Tehler, Anders; Little, Damon P.; Farris, James S. (August 2003). "The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, Fungi". Mycological Research. 107 (Pt 8): 901–916. doi:10.1017/s0953756203008128. ISSN 0953-7562. PMID 14531615.
- ^ Galindo, Luis Javier; López-García, Purificación; Torruella, Guifré; Karpov, Sergey; Moreira, David (17 August 2021). "Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota". Nature Communications. 12 (1). doi:10.1038/s41467-021-25308-w.
- ^ Chang, Y; Wang, S; Sekimoto, S; Aerts, AL; Choi, C; Clum, A; LaButti, KM; Lindquist, EA; Yee Ngan, C; Ohm, RA; Salamov, AA; Grigoriev, IV; Spatafora, JW; Berbee, ML (14 May 2015). "Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants". Genome Biology and Evolution. 7 (6): 1590–601. doi:10.1093/gbe/evv090. PMC 4494064. PMID 25977457.
- ^ Li Y, Steenwyk JL, Chang Y, Wang Y, James TY, Stajich JE, Spatafora JW, Groenewald M, Dunn CW, Hittinger CT, Shen X, Rokas, A (2021). "A genome-scale phylogeny of the kingdom Fungi". Current Biology. 31 (8): 1653–1665. Bibcode:2021CBio...31E1653L. doi:10.1016/j.cub.2021.01.074. PMC 8347878. PMID 33607033.
- ^ Spatafora, Joseph W.; Chang, Ying; Benny, Gerald L.; Lazarus, Katy; Smith, Matthew E.; Berbee, Mary L.; Bonito, Gregory; Corradi, Nicolas; Grigoriev, Igor; Gryganskyi, Andrii; James, Timothy Y.; O’Donnell, Kerry; Roberson, Robert W.; Taylor, Thomas N.; Uehling, Jessie (2016). "A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data". Mycologia. 108 (5): 1028–1046. doi:10.3852/16-042. ISSN 0027-5514. PMC 6078412. PMID 27738200.
- ^ Schüßler, Arthur; Schwarzott, Daniel; Walker, Christopher (December 2001). "A new fungal phylum, the Glomeromycota: phylogeny and evolution". Mycological Research. 105 (12): 1413–1421. doi:10.1017/S0953756201005196. ISSN 1469-8102.