Draft:Knut Reinert
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| Submission declined on 1 February 2025 by Johannes Maximilian (talk). This submission is not adequately supported by reliable sources. Reliable sources are required so that information can be verified. If you need help with referencing, please see Referencing for beginners and Citing sources.
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Comment: The subject is notable, however, the draft lacks reasonable references to reliable sources. What I find odd is that the habilitation is not described. Please add it. Best, --Johannes (Talk) (Contribs) (Articles) 16:17, 1 February 2025 (UTC)
Knut Reinert (* 19th January 1968 in Saarlouis) is a German computer scientist and bioinformatician renowned for his contributions to computational biology and algorithm development.[1][2] He is currently a full professor at the Institute of Computer Science at Free University of Berlin, where he leads the Algorithmic Bioinformatics research group.[3]
Early Life and Education
[edit]Reinert completed his undergraduate studies in Computer Science at the university of the Saarland in 1994.[2] He then pursued his doctoral studies at the Max Planck Institute for Informatics in Saarbrücken, earning his Ph.D. in Computer Science in 1999 under the supervision of Kurt Mehlhorn and Hans-Peter Lenhof.[4][5][6] His doctoral thesis, titled "A Polyhedral Approach to Sequence Alignment Problems", focused on solving NP-hard sequence alignment problems for Proteins and RNA using methods from combinatorial optimization.[7]
Academic Career
[edit]After completing his Ph.D., Reinert worked as a postdoctoral researcher at Celera Genomics (Rockville, USA) from 1999 to 2002.[4][5] During this time, he worked in the Informatics Research group under the guidance of Gene Myers[8] on the first whole genome shotgun assemblies of Drosophila melanogaster[9] and Human.[10] Later he also contributed on algorithms for the analysis of mass spectrometry analysis.[11]
In 2002, Reinert joined Free University of Berlin as a professor in the Institute of Computer Science.[5] He established the Algorithmic Bioinformatics research group, which has since become a leading center for bioinformatics research in Germany. Since 2015, his group is partner in the Center for Integrative Bioinformatics within the German Network for Bioinformatics Infrastructure project.[12]
Research
[edit]Reinert's research lies at the intersection of computer science and biology. His work spans several key areas, including algorithms for sequence analysis, processing large-scale sequencing data, and mass spectrometry data analysis.[1][2] Focusing on developing efficient algorithms and data structures for analysing large-scale biological data, he started the development of SeqAn[13], an open-source C++ software library and co-started the OpenMS[11] project together with Oliver Kohlbacher.
Awards and Honors
[edit]Knut Reinert was appointed a Max-Planck fellow in 2014[14] and was accepted as a member of the German Academic Scholarship Foundation[15] .
External Links
[edit]- Knut Reinert's profile at Freie Universität Berlin
- List of Knut Reinert's publications at Google Scholar
- Algorithmic Bioinformatics research group website
- SeqAn library website
- OpenMS framework website
References
[edit]- ^ a b https://research.com/u/knut-reinert, accessed 09.04.2025
- ^ a b c https://orcid.org/0000-0003-3078-8129, accessed 09.04.2025
- ^ https://www.mi.fu-berlin.de/en/inf/groups/abi/members/Professors/reinert.html, accessed 08.04.2025
- ^ a b Vita at the Max Planck Institute for molecular genetics, accessed 19.07.2024
- ^ a b c https://idw-online.de/de/news56671, accessed 09.04.29025
- ^ https://zbi-www.bioinf.uni-sb.de/en/lenhof-home/lenhof-people/, accessed 09.04.2025
- ^ K. Reinert, A polyhedral approach to sequence alignment problems. (1999). DOI:http://dx.doi.org/10.22028/D291-25731
- ^ https://www.nvidia.com/content/cuda/spotlights/knut-reinert-fuberlin.html, accessed 09.04.2025
- ^ Mark D. Adams et al., The Genome Sequence of Drosophila melanogaster. Science287, 2185-2195(2000). DOI:10.1126/science.287.5461.2185
- ^ J. Craig Venter et al., The Sequence of the Human Genome. Science291, 1304-1351(2001). DOI:10.1126/science.1058040
- ^ a b Röst, H., Sachsenberg, T., Aiche, S. et al. OpenMS: a flexible open-source software platform for mass spectrometry data analysis. Nat Methods 13, 741–748 (2016). DOI:https://doi.org/10.1038/nmeth.3959
- ^ https://www.denbi.de/network/center-for-integrative-bioinformatics-cibi, accessed 09.04.2025
- ^ Döring, A., Weese, D., Rausch, T. et al. SeqAn An efficient, generic C++ library for sequence analysis. BMC Bioinformatics 9, 11 (2008). DOI:https://doi.org/10.1186/1471-2105-9-11
- ^ Press release Nr. 112/2014 of Free University of Berlin, accessed 19.07.2024
- ^ https://www.studienstiftung.de/